TY - GEN
T1 - Texture descriptors for classifying sparse, irregularly sampled optical endomicroscopy images
AU - Leonovych, Oleksii
AU - Koujan, Mohammad Rami
AU - Akram, Ahsan
AU - Westerfeld, Jody
AU - Wilson, David
AU - Dhaliwal, Kevin
AU - McLaughlin, Stephen
AU - Perperidis, Antonios
PY - 2018/8/21
Y1 - 2018/8/21
N2 - Optical endomicroscopy (OEM) is a novel real-time imaging technology that provides endoscopic images at the microscopic level. Clinical OEM procedures generate large datasets making their post procedural analysis a subjective and laborious task. There has been effort to automatically classify OEM frame sequences into relevant classes in aid of a fast and reliable diagnosis. Most existing classification approaches adopt established texture metrics, such as Local Binary Patterns (LBPs) derived from the regularly sampled grid images. However, due to the nature of image transmission through coherent fibre bundles, raw OEM data are sparsely and irregularly sampled, post-processed to a regularly sampled grid image format. This paper adapts Local Binary Patterns, a commonly used image texture descriptor, taking into consideration the sparse, irregular sampling imposed by the imaging fibre bundle on OEM images. The performance of Sparse Irregular Local Binary Patterns (SILBP) is assessed in conjunction with widely used classifiers, including Support Vector Machines, Random Forests and Linear Discriminant Analysis, for the detection of uninformative frames (i.e. noise and motion-artefacts) within pulmonary OEM frame sequences. Uninformative frames can comprise a considerable proportion of a dataset, increasing the resources required to analyse the data and impacting on any automated quantification analysis. SILBPs achieve comparable performance to the optimal LBPs (>92% overall accuracy), while employing <13% of the associated data.
AB - Optical endomicroscopy (OEM) is a novel real-time imaging technology that provides endoscopic images at the microscopic level. Clinical OEM procedures generate large datasets making their post procedural analysis a subjective and laborious task. There has been effort to automatically classify OEM frame sequences into relevant classes in aid of a fast and reliable diagnosis. Most existing classification approaches adopt established texture metrics, such as Local Binary Patterns (LBPs) derived from the regularly sampled grid images. However, due to the nature of image transmission through coherent fibre bundles, raw OEM data are sparsely and irregularly sampled, post-processed to a regularly sampled grid image format. This paper adapts Local Binary Patterns, a commonly used image texture descriptor, taking into consideration the sparse, irregular sampling imposed by the imaging fibre bundle on OEM images. The performance of Sparse Irregular Local Binary Patterns (SILBP) is assessed in conjunction with widely used classifiers, including Support Vector Machines, Random Forests and Linear Discriminant Analysis, for the detection of uninformative frames (i.e. noise and motion-artefacts) within pulmonary OEM frame sequences. Uninformative frames can comprise a considerable proportion of a dataset, increasing the resources required to analyse the data and impacting on any automated quantification analysis. SILBPs achieve comparable performance to the optimal LBPs (>92% overall accuracy), while employing <13% of the associated data.
KW - Frame classification
KW - Irregular sampling
KW - Local binary patterns
KW - Optical endomicroscopy
KW - Texture analysis
UR - http://www.scopus.com/inward/record.url?scp=85052890608&partnerID=8YFLogxK
U2 - 10.1007/978-3-319-95921-4_17
DO - 10.1007/978-3-319-95921-4_17
M3 - Conference contribution
AN - SCOPUS:85052890608
SN - 9783319959207
T3 - Communications in Computer and Information Science
SP - 165
EP - 176
BT - Medical Image Understanding and Analysis
A2 - Nixon, Mark
A2 - Mahmoodi, Sasan
A2 - Zwiggelaar, Reyer
PB - Springer
T2 - 22nd Conference on Medical Image Understanding and Analysis 2018
Y2 - 9 July 2018 through 11 July 2018
ER -