Semantic visualisation of gene expression information

Andy Taylor, Kenneth McLeod, Albert Burger

Research output: Contribution to journalConference article

1 Citation (Scopus)

Abstract

The Edinburgh Mouse Atlas of Gene Expression (EMAGE) publishes the results of gene expression experiments on the mouse embryo. Whilst this resource uses visual mechanisms to display the result of a single experiment, it currently provides no technique for the visual navigation of data. Ideally, a semantic visual navigation mechanism would exist. Our work focuses on trying to understand the requirements for such a mechanism. To this end, a prototype solution (based on sunburst visualisations) is being built. This paper presents the prototype and reports on the initial feedback from users.

Original languageEnglish
Pages (from-to)10-20
Number of pages11
JournalCEUR Workshop Proceedings
Volume1040
Publication statusPublished - 2013
Event3rd CUBIST (Combining and Uniting Business Intelligence with Semantic Technologies) Workshop co-located with the 11th International Conference on Formal Concept Analysis 2013 - Dresden, Germany
Duration: 22 May 201322 May 2013

Keywords

  • Big data
  • Gene expression information
  • Semantic visualisation
  • Usability

ASJC Scopus subject areas

  • Computer Science(all)

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