Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application

Rosa Filgueira; David E. Singh; Florin Isaila; Jesús Carretero; Antonio García Loureiro

doi:10.1109/IPDPS.2007.370585

Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application

Rosa Filgueira^*, David E. Singh, Florin Isaila, Jesús Carretero, Antonio García Loureiro

^*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

1 Citation (Scopus)

Abstract

This paper presents the optimization and evaluation of parallel I/O for the BIPS3D parallel irregular application, a 3-dimensional simulation of BJT and HBT bipolar devices. The parallel version of BIPS3D employs Metis, a library for partitioning graphs, finite element meshes, or sparse matrices. First, we show how the partitioning information provided by Metis can be used in order to improve the performance of parallel I/O. Second, we propose a novel technique, called Interval Data Grouping (IDG), which exploits the data replication of mesh nodes for optimizing the scheduling of the parallel file operations. Finally, we evaluate the parallel I/O version of BIPS3D for various existing parallel I/O techniques and present an in-depth analysis of the IDG performance.

Original language	English
Title of host publication	2007 IEEE International Parallel and Distributed Processing Symposium
Publisher	IEEE
ISBN (Print)	1424409098
DOIs	https://doi.org/10.1109/IPDPS.2007.370585
Publication status	Published - 2007
Event	21st International Parallel and Distributed Processing Symposium 2007 - Long Beach, United States Duration: 26 Mar 2007 → 30 Mar 2007

Conference

Conference	21st International Parallel and Distributed Processing Symposium 2007
Abbreviated title	IPDPS 2007
Country/Territory	United States
City	Long Beach
Period	26/03/07 → 30/03/07

ASJC Scopus subject areas

Hardware and Architecture
Software
General Mathematics

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10.1109/IPDPS.2007.370585

Cite this

@inproceedings{63da148d700144c29752ce9eb7d51792,

title = "Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application",

abstract = "This paper presents the optimization and evaluation of parallel I/O for the BIPS3D parallel irregular application, a 3-dimensional simulation of BJT and HBT bipolar devices. The parallel version of BIPS3D employs Metis, a library for partitioning graphs, finite element meshes, or sparse matrices. First, we show how the partitioning information provided by Metis can be used in order to improve the performance of parallel I/O. Second, we propose a novel technique, called Interval Data Grouping (IDG), which exploits the data replication of mesh nodes for optimizing the scheduling of the parallel file operations. Finally, we evaluate the parallel I/O version of BIPS3D for various existing parallel I/O techniques and present an in-depth analysis of the IDG performance.",

author = "Rosa Filgueira and Singh, {David E.} and Florin Isaila and Jes{\'u}s Carretero and Loureiro, {Antonio Garc{\'i}a}",

year = "2007",

doi = "10.1109/IPDPS.2007.370585",

language = "English",

isbn = "1424409098",

booktitle = "2007 IEEE International Parallel and Distributed Processing Symposium",

publisher = "IEEE",

address = "United States",

note = "21st International Parallel and Distributed Processing Symposium 2007, IPDPS 2007 ; Conference date: 26-03-2007 Through 30-03-2007",

}

Filgueira, R, Singh, DE, Isaila, F, Carretero, J & Loureiro, AG 2007, Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application. in 2007 IEEE International Parallel and Distributed Processing Symposium., 4228313, IEEE, 21st International Parallel and Distributed Processing Symposium 2007, Long Beach, California, United States, 26/03/07. https://doi.org/10.1109/IPDPS.2007.370585

TY - GEN

T1 - Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application

AU - Filgueira, Rosa

AU - Singh, David E.

AU - Isaila, Florin

AU - Carretero, Jesús

AU - Loureiro, Antonio García

PY - 2007

Y1 - 2007

N2 - This paper presents the optimization and evaluation of parallel I/O for the BIPS3D parallel irregular application, a 3-dimensional simulation of BJT and HBT bipolar devices. The parallel version of BIPS3D employs Metis, a library for partitioning graphs, finite element meshes, or sparse matrices. First, we show how the partitioning information provided by Metis can be used in order to improve the performance of parallel I/O. Second, we propose a novel technique, called Interval Data Grouping (IDG), which exploits the data replication of mesh nodes for optimizing the scheduling of the parallel file operations. Finally, we evaluate the parallel I/O version of BIPS3D for various existing parallel I/O techniques and present an in-depth analysis of the IDG performance.

AB - This paper presents the optimization and evaluation of parallel I/O for the BIPS3D parallel irregular application, a 3-dimensional simulation of BJT and HBT bipolar devices. The parallel version of BIPS3D employs Metis, a library for partitioning graphs, finite element meshes, or sparse matrices. First, we show how the partitioning information provided by Metis can be used in order to improve the performance of parallel I/O. Second, we propose a novel technique, called Interval Data Grouping (IDG), which exploits the data replication of mesh nodes for optimizing the scheduling of the parallel file operations. Finally, we evaluate the parallel I/O version of BIPS3D for various existing parallel I/O techniques and present an in-depth analysis of the IDG performance.

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U2 - 10.1109/IPDPS.2007.370585

DO - 10.1109/IPDPS.2007.370585

M3 - Conference contribution

AN - SCOPUS:34548704746

SN - 1424409098

BT - 2007 IEEE International Parallel and Distributed Processing Symposium

PB - IEEE

T2 - 21st International Parallel and Distributed Processing Symposium 2007

Y2 - 26 March 2007 through 30 March 2007

ER -

Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application

Abstract

Conference

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