Abstract
Coarse-grained (CG) models have proven to be very effective tools in the study of phenomena or systems involving large time-and length-scales. By decreasing the degrees of freedom in the system and using softer interactions than seen in atomistic models, larger time steps can be used and much longer simulation times can be studied. CG simulations are widely used to study systems of biological importance that are beyond the reach of atomistic simulation, necessitating a computationally efficient and accurate CG model for water. In this review, we discuss the methods used for developing CG water models and the relative advantages and disadvantages of the resulting models. In general, CG water models differ with regard to how many waters each CG group or bead represents, whether analytical or tabular potentials have been used to describe the interactions, and how the model incorporates electrostatic interactions. How the models are parameterised, which typically depends on their application, is also discussed.
| Original language | English |
|---|---|
| Pages (from-to) | 671-681 |
| Number of pages | 11 |
| Journal | Molecular Simulation |
| Volume | 38 |
| Issue number | 8-9 |
| DOIs | |
| Publication status | Published - 2012 |
Keywords
- anomalies
- coarse graining
- force field development
- mapping
- molecular simulation
ASJC Scopus subject areas
- General Chemistry
- Information Systems
- Modelling and Simulation
- General Chemical Engineering
- General Materials Science
- Condensed Matter Physics
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