API-centric linked data integration: the Open PHACTS discovery platform case study

Paul Groth, Antonis Loizou, Alasdair J G Gray, Carole Goble, Lee Harland, Steve Pettifer

Research output: Contribution to journalArticle

Abstract

Data integration is a key challenge faced in pharmacology where there are numerous heterogeneous databases spanning multiple domains (e.g. chemistry and biology). To address this challenge, the Open PHACTS consortium has developed the Open PHACTS Discovery Platform that leverages Linked Data to provide integrated access to pharmacology databases. Between its launch in April 2013 and March 2014, the platform has been accessed over 13.5 million times and has multiple applications that integrate with it. In this work, we discuss how Application Programming Interfaces can extend the classical Linked Data Application Architecture to facilitate data integration. Additionally, we show how the Open PHACTS Discovery Platform implements this extended architecture.

LanguageEnglish
Pages12-18
Number of pages7
JournalJournal of Biomedical Semantics
Volume29
DOIs
Publication statusPublished - Dec 2014

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Data integration
Application programming interfaces (API)

Keywords

  • API
  • Data integration
  • Data spaces
  • Linked Data
  • Pharmacology

Cite this

Groth, Paul ; Loizou, Antonis ; Gray, Alasdair J G ; Goble, Carole ; Harland, Lee ; Pettifer, Steve. / API-centric linked data integration : the Open PHACTS discovery platform case study. In: Journal of Biomedical Semantics. 2014 ; Vol. 29. pp. 12-18.
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API-centric linked data integration : the Open PHACTS discovery platform case study. / Groth, Paul; Loizou, Antonis; Gray, Alasdair J G; Goble, Carole; Harland, Lee; Pettifer, Steve.

In: Journal of Biomedical Semantics, Vol. 29, 12.2014, p. 12-18.

Research output: Contribution to journalArticle

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